#include #include #include "Functional.hh" #include "SympyCdb.hh" #include "PreClean.hh" #include "Cleanup.hh" #include "Parser.hh" #include "Kernel.hh" #include "DisplaySympy.hh" #include "algorithms/substitute.hh" using namespace cadabra; // #define DEBUG 1 #ifndef NO_SYMPY sympy::SympyBridge::SympyBridge(const Kernel& k, std::shared_ptr ex) : DisplaySympy(k, *ex), ex(ex) { } sympy::SympyBridge::~SympyBridge() { } pybind11::object sympy::SympyBridge::export_ex() { std::ostringstream str; output(str); pybind11::module sympy_parser = pybind11::module::import("sympy.parsing.sympy_parser"); auto parse = sympy_parser.attr("parse_expr"); #ifdef DEBUG std::cerr << str.str() << std::endl; #endif pybind11::object ret = parse(str.str()); return ret; } void sympy::SympyBridge::import_ex(const std::string& s) { preparse_import(s); #ifdef DEBUG std::cerr << s << std::endl; #endif auto ptr = std::make_shared(); cadabra::Parser parser(ptr); std::stringstream istr(s); istr >> parser; pre_clean_dispatch_deep(kernel, *parser.tree); cleanup_dispatch_deep(kernel, *parser.tree); #ifdef DEBUG std::cerr << "importing " << parser.tree->begin() << std::endl; #endif import(*parser.tree); Ex::iterator first=parser.tree->begin(); Ex::iterator orig=tree.begin(); ex->move_ontop(orig, first); } #endif Ex::iterator sympy::apply(const Kernel& kernel, Ex& ex, Ex::iterator& it, const std::vector& wrap, std::vector args, const std::string& method) { // We first need to print the sub-expression using DisplaySympy, // optionally with the head wrapped around it and the args added // (if present). std::ostringstream str; for(size_t i=0; i0) if(args.size()>0) { for(size_t i=0; i0) str << ")"; // We then execute the expression in Python. //ex.print_recursive_treeform(std::cerr, it); #ifdef DEBUG std::cerr << "feeding " << str.str() << std::endl; std::cerr << "which is " << it << std::endl; #endif auto module = pybind11::module::import("sympy.parsing.sympy_parser"); auto parse = module.attr("parse_expr"); pybind11::object obj = parse(str.str()); //std::cerr << "converting result to string" << std::endl; auto __str__ = obj.attr("__str__"); pybind11::object res = __str__(); std::string result = res.cast(); #ifdef DEBUG std::cerr << "result " << result << std::endl; #endif // After that, we construct a new sub-expression from this string by using our // own parser, and replace the original. result = ds.preparse_import(result); auto ptr = std::make_shared(); cadabra::Parser parser(ptr); std::stringstream istr(result); istr >> parser; pre_clean_dispatch_deep(kernel, *parser.tree); cleanup_dispatch_deep(kernel, *parser.tree); //parser.tree->print_recursive_treeform(std::cerr, parser.tree->begin()); ds.import(*parser.tree); Ex::iterator first=parser.tree->begin(); #ifdef DEBUG std::cerr << "reparsed " << first.node << "\n" << Ex(first) << std::endl; std::cerr << "before " << it.node << "\n" << Ex(it) << std::endl; #endif it = ex.move_ontop(it, first); #ifdef DEBUG std::cerr << "after " << Ex(it) << std::endl; std::cerr << "top node " << it.node << std::endl; #endif return it; } Ex sympy::fill_matrix(const Kernel& kernel, Ex& ex, Ex& rules) { // check that object has two children only. if(ex.number_of_children(ex.begin())!=2) { throw ConsistencyException("Object should have exactly two indices."); } Ex::iterator ind1=ex.child(ex.begin(), 0); Ex::iterator ind2=ex.child(ex.begin(), 1); // Get Indices property and from there Coordinates. const Indices *prop1 = kernel.properties.get(ind1); const Indices *prop2 = kernel.properties.get(ind2); if(prop1!=prop2 || prop1==0) throw ConsistencyException("Need the indices of object to be declared with Indices property."); // Run over all values of Coordinates, construct matrix. Ex matrix("\\matrix"); auto cols=matrix.append_child(matrix.begin(), str_node("\\comma")); for(unsigned c1=0; c1values.size(); ++c1) { auto row=matrix.append_child(cols, str_node("\\comma")); for(unsigned c2=0; c2values.size(); ++c2) { // Generate an expression with this component, apply substitution, then stick // the result into the string that will go to sympy. Ex c(ex.begin()); Ex::iterator cit1=c.child(c.begin(), 0); Ex::iterator cit2=c.child(c.begin(), 1); cit1=c.replace_index(cit1, prop1->values[c1].begin(), true); cit2=c.replace_index(cit2, prop1->values[c2].begin(), true); Ex::iterator cit=c.begin(); substitute subs(kernel, c, rules); if(subs.can_apply(cit)) { subs.apply(cit); matrix.append_child(row, cit); } else { zero( matrix.append_child(row, str_node("1"))->multiplier ); } } } return matrix; } void sympy::invert_matrix(const Kernel& kernel, Ex& ex, Ex& rules, const Ex& tocompute) { if(ex.number_of_children(ex.begin())!=2) { throw ConsistencyException("Object should have exactly two indices."); } auto matrix = fill_matrix(kernel, ex, rules); auto top=matrix.begin(); std::vector wrap; sympy::apply(kernel, matrix, top, wrap, std::vector(), ".inv()"); //matrix.print_recursive_treeform(std::cerr, top); Ex::iterator ind1=ex.child(ex.begin(), 0); Ex::iterator ind2=ex.child(ex.begin(), 1); const Indices *prop1 = kernel.properties.get(ind1); const Indices *prop2 = kernel.properties.get(ind2); Ex::iterator ruleslist=rules.begin(); // Now we need to iterate over the components again and construct sparse rules. auto cols=matrix.begin(matrix.begin()); // outer comma auto row=matrix.begin(cols); // first inner comma for(unsigned c1=0; c1values.size(); ++c1) { auto el =matrix.begin(row); // first element of first inner comma for(unsigned c2=0; c2values.size(); ++c2) { if(el->is_zero()==false) { Ex rule("\\equals"); auto rit = rule.append_child(rule.begin(), tocompute.begin()); /* auto cvit = */ rule.append_child(rule.begin(), Ex::iterator(el)); auto i = rule.begin(rit); //std::cerr << c1 << ", " << c2 << std::endl; i = rule.replace_index(i, prop1->values[c1].begin(), true); // i->fl.parent_rel=ind1->fl.parent_rel; ++i; i = rule.replace_index(i, prop1->values[c2].begin(), true); // i->fl.parent_rel=ind1->fl.parent_rel; rules.append_child(ruleslist, rule.begin()); //rule.print_recursive_treeform(std::cerr, rule.begin()); } ++el; } ++row; } } void sympy::determinant(const Kernel& kernel, Ex& ex, Ex& rules, const Ex& tocompute) { auto matrix = fill_matrix(kernel, ex, rules); auto top=matrix.begin(); std::vector wrap; sympy::apply(kernel, matrix, top, wrap, std::vector(), ".det()"); Ex rule("\\equals"); rule.append_child(rule.begin(), tocompute.begin()); rule.append_child(rule.begin(), matrix.begin()); rules.append_child(rules.begin(), rule.begin()); } void sympy::trace(const Kernel& kernel, Ex& ex, Ex& rules, const Ex& tocompute) { auto matrix = fill_matrix(kernel, ex, rules); auto top=matrix.begin(); std::vector wrap; sympy::apply(kernel, matrix, top, wrap, std::vector(), ".trace()"); Ex rule("\\equals"); rule.append_child(rule.begin(), tocompute.begin()); rule.append_child(rule.begin(), matrix.begin()); rules.append_child(rules.begin(), rule.begin()); }